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ORF Finder (Open Reading Frame Finder)

PubMed Entrez BLAST OMIM Taxonomy Structure

gi|28277695|gb|BC045444.1| Danio rerio cDNA clone MGC:55744 IMAGE:3816387, complete cds

Program Database with parameters














Length: 332 aa

    242 atggccgaatcggacaaaataaacatcgattcgatcatccagcgc
        M  A  E  S  D  K  I  N  I  D  S  I  I  Q  R 
    287 cttttggaagtgaagggctcaagacctggtaaaaatgttcagtta
        L  L  E  V  K  G  S  R  P  G  K  N  V  Q  L 
    332 actgagcaagagattcgaggattgtgtctaaaatctcgagaaatc
        T  E  Q  E  I  R  G  L  C  L  K  S  R  E  I 
    377 tttcttagtcagccaatactactggagctggaggcacccctcaag
        F  L  S  Q  P  I  L  L  E  L  E  A  P  L  K 
    422 atttgtggtgatgttcatggtcagtactatgacctgctcaggctt
        I  C  G  D  V  H  G  Q  Y  Y  D  L  L  R  L 
    467 tttgagtatggaggatatccaccagagagtaactacctatttctg
        F  E  Y  G  G  Y  P  P  E  S  N  Y  L  F  L 
    512 ggagactatgttgacagaggcaagcagtcactggagaccatctgc
        G  D  Y  V  D  R  G  K  Q  S  L  E  T  I  C 
    557 ctgctgcttgcttacaagatcaaatatccagagaacttctttctt
        L  L  L  A  Y  K  I  K  Y  P  E  N  F  F  L 
    602 ctcagaggaaaccatgaatgtgcctcaatcaacaggatatatgga
        L  R  G  N  H  E  C  A  S  I  N  R  I  Y  G 
    647 ttttatgatgaatgtaaaagacgttataacatcaagctctggaaa
        F  Y  D  E  C  K  R  R  Y  N  I  K  L  W  K 
    692 acattcacagactgtttcaactgcttgccagtagctgctattgtg
        T  F  T  D  C  F  N  C  L  P  V  A  A  I  V 
    737 gatgaaaagattttttgttgtcatggaggtctttctccagacctg
        D  E  K  I  F  C  C  H  G  G  L  S  P  D  L 
    782 caatcaatggaacagattcggcgtgtgatgaggcctacggatgtc
        Q  S  M  E  Q  I  R  R  V  M  R  P  T  D  V 
    827 cctgaccagggtttgctgtgtgatctgctctgggctgaccctgat
        P  D  Q  G  L  L  C  D  L  L  W  A  D  P  D 
    872 aaagatgtcatgggctggggagagaatgatcgtggtgtttccttc
        K  D  V  M  G  W  G  E  N  D  R  G  V  S  F 
    917 accttcgggtctgatgtcgtggccaagtttttgcacaaacatgac
        T  F  G  S  D  V  V  A  K  F  L  H  K  H  D 
    962 atggatctcatatgcagagcccatcaggtggtggaggatggctac
        M  D  L  I  C  R  A  H  Q  V  V  E  D  G  Y 
   1007 gagttctttgcgaagaggcagttagtcacgcttttctctgctccc
        E  F  F  A  K  R  Q  L  V  T  L  F  S  A  P 
   1052 aactactgcggcgagtttgacaatgcaggtgccatgatgagtgtt
        N  Y  C  G  E  F  D  N  A  G  A  M  M  S  V 
   1097 gatgagacccttatgtgctcatttcagattctgaaaccagcagag
        D  E  T  L  M  C  S  F  Q  I  L  K  P  A  E 
   1142 aagaaggtgctgtcatatggcggcgctggaggatttgggaacagc
        K  K  V  L  S  Y  G  G  A  G  G  F  G  N  S 
   1187 agacctgtaactcctcctcggaacacagccaagggtggcaaagcc
        R  P  V  T  P  P  R  N  T  A  K  G  G  K  A 
   1232 aagaaataa 1240   
        K  K  * 
FramefromtoLength
+2242..1240999
+3432..725294
-2757..972216
-11625..1834210
+3822..1031210
-1785..985201
-31107..1280174
-21282..1446165
-31431..1589159
+12026..2181156
+22000..2143144
-1626..760135
+21601..1711111
-21897..2001105